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tfaD putative tail fiber assembly protein TfaD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945171, updated on 3-Dec-2024

Summary

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Official Symbol
tfaD
Official Full Name
putative tail fiber assembly protein TfaD
Primary source
ECOCYC:G6315
Locus tag
b0561
See related
ASAP:ABE-0001917
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0553; ybcX
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Genomic context

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Sequence:
NC_000913.3 (581534..582097)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF3950 domain-containing protein YlcI Neighboring gene putative DNA-packaging protein NohD Neighboring gene pseudo Neighboring gene pseudo Neighboring gene protein TfaX

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Temporal gene-expression in Escherichia coli K-12 biofilms. Domka J, et al. Environ Microbiol, 2007 Feb. PMID 17222132
  2. Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Rooney JP, et al. Genomics, 2009 Jan. PMID 18824089, Free PMC Article
  3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
putative tail fiber assembly protein TfaD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    581534..582097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009518755.1 putative tail fiber assembly protein TfaD [Escherichia coli str. K-12 substr. MG1655]

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG5525
    Location:1 → 187
    YbcX; Phage terminase, large subunit GpA [Mobilome: prophages, transposons]
Nucleotide Protein
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