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ybeT Sel1 repeat-containing protein YbeT [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945243, updated on 17-Dec-2024

Summary

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Official Symbol
ybeT
Official Full Name
Sel1 repeat-containing protein YbeT
Primary source
ECOCYC:G6354
Locus tag
b0647
See related
ASAP:ABE-0002213
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0640
Summary
Probable false positive lipoprotein prediction, Cys not conserved. [More information is available at EcoGene: EG13650].
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Genomic context

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Sequence:
NC_000913.3 (678852..679406, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene Sel1 repeat-containing protein YbeQ Neighboring gene DUF1266 domain-containing protein YbeR Neighboring gene J domain-containing protein DjlB Neighboring gene DUF1266 domain-containing protein YbeU Neighboring gene co-chaperone DjlC Neighboring gene chaperone protein HscC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  2. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Sel1 repeat-containing protein YbeT

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    678852..679406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415180.1 Sel1 repeat-containing protein YbeT [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415180.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A793IHC3
    Conserved Domains (2) summary
    COG0790
    Location:30 → 184
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:83 → 112
    SLR; SLR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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