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rhsC rhs element protein RhsC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945306, updated on 3-Dec-2024

Summary

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Official Symbol
rhsC
Official Full Name
rhs element protein RhsC
Primary source
ECOCYC:EG10848
Locus tag
b0700
See related
ASAP:ABE-0002392
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0689
Summary
UniProtKB prediction of 26 aa signal peptide is a probable false positive. [More information is available at EcoGene: EG10848]. There are five homologous rhs loci that encode hydrophilic proteins with repetitive sequence elements and divergent C-termini . [More information is available at EcoCyc: EG10848].
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Genomic context

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Sequence:
NC_000913.3 (729583..733776)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene K(+) transporting P-type ATPase subunit KdpA Neighboring gene K(+) transporting P-type ATPase subunit KdpF Neighboring gene DUF2517 domain-containing protein YbfA Neighboring gene uncharacterized protein YbfB Neighboring gene pseudo Neighboring gene uncharacterized protein YbfC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fitness cost of a mcr-1-carrying IncHI2 plasmid. Ma K, et al. PLoS One, 2018. PMID 30586457, Free PMC Article
  2. A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome. Lin RJ, et al. J Mol Biol, 1984 Jul 25. PMID 6086936
  3. A stationary-phase-dependent viability block governed by two different polypeptides from the RhsA genetic element of Escherichia coli K-12. Vlazny DA, et al. J Bacteriol, 1995 Apr. PMID 7721712, Free PMC Article
  4. Correlation of Rhs elements with Escherichia coli population structure. Hill CW, et al. Genetics, 1995 Sep. PMID 8536964, Free PMC Article
  5. rhs gene family of Escherichia coli K-12. Sadosky AB, et al. J Bacteriol, 1989 Feb. PMID 2644231, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
rhs element protein RhsC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    729583..733776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415229.1 rhs element protein RhsC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415229.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAI8DWF4
    Conserved Domains (3) summary
    COG3209
    Location:536 → 1251
    RhsA; Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only]
    pfam05593
    Location:468 → 503
    RHS_repeat; RHS Repeat
    cl21497
    Location:1 → 29
    PAAR_like; proline-alanine-alanine-arginine (PAAR) repeat superfamily
Nucleotide Protein
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