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abrB putative regulator [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945321, updated on 3-Dec-2024

Summary

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Official Symbol
abrB
Official Full Name
putative regulator
Primary source
ECOCYC:G6384
Locus tag
b0715
See related
ASAP:ABE-0002435
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0704; ybgN
Summary
An abrB mutation causes an unstable phenotype with respect to anaerobic, Ada-independent expression of the aidB gene . [More information is available at EcoCyc: G6384].
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Genomic context

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Sequence:
NC_000913.3 (746723..747769, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 5-oxoprolinase component B Neighboring gene 5-oxoprolinase component C Neighboring gene 5-oxoprolinase component A Neighboring gene endonuclease VIII Neighboring gene putative fimbrial protein YbgO Neighboring gene putative fimbrial chaperone YbgP Neighboring gene putative fimbrial usher protein YbgQ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Induction of the Escherichia coli aidB gene under oxygen-limiting conditions requires a functional rpoS (katF) gene. Volkert MR, et al. J Bacteriol, 1994 Dec. PMID 8002588, Free PMC Article
  2. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    746723..747769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415243.4 putative regulator [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415243.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377F7B2
    Conserved Domains (1) summary
    COG3180
    Location:1 → 345
    AbrB; Uncharacterized membrane protein AbrB, regulator of aidB expression [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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