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sfmH putative fimbrial adhesin protein SfmH [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945407, updated on 17-Dec-2024

Summary

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Official Symbol
sfmH
Official Full Name
putative fimbrial adhesin protein SfmH
Primary source
ECOCYC:G6293
Locus tag
b0533
See related
ASAP:ABE-0001832
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0526
Summary
One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG13884]. sfmH was shown using in vivo-induced antigen technology to be specifically expressed during human infection in Escherichia coli O157:H7 EDL933 . [More information is available at EcoCyc: G6293].
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Genomic context

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Sequence:
NC_000913.3 (562336..563319)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial chaperone SfmC Neighboring gene putative fimbrial usher protein SfmD Neighboring gene putative fimbrial protein SfmF Neighboring gene putative LuxR family transcriptional regulator FimZ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Use of in vivo-induced antigen technology for identification of Escherichia coli O157:H7 proteins expressed during human infection. John M, et al. Infect Immun, 2005 May. PMID 15845468, Free PMC Article
  2. FimH forms catch bonds that are enhanced by mechanical force due to allosteric regulation. Yakovenko O, et al. J Biol Chem, 2008 Apr 25. PMID 18292092, Free PMC Article
  3. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
  4. Generating tetracycline-inducible auxotrophy in Escherichia coli and Salmonella enterica serovar Typhimurium by using an insertion element and a hyperactive transposase. Köstner M, et al. Appl Environ Microbiol, 2006 Jul. PMID 16820464, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell adhesion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cell adhesion involved in single-species biofilm formation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in pilus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in pilus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative fimbrial adhesin protein SfmH

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    562336..563319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415066.2 putative fimbrial adhesin protein SfmH [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415066.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H3JCH5, A0AAV3HGA8, C3TKI2
    Conserved Domains (1) summary
    PRK15199
    Location:2 → 327
    fimH; type 1 fimbrin D-mannose specific adhesin FimH
Nucleotide Protein
Heading Accession and Version

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