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yqaA DedA family protein YqaA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945419, updated on 3-Dec-2024

Summary

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Official Symbol
yqaA
Official Full Name
DedA family protein YqaA
Primary source
ECOCYC:G7407
Locus tag
b2689
See related
ASAP:ABE-0008847
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2684
Summary
YqaA is an inner membrane protein with four predicted transmembrane domains. [More information is available at EcoCyc: G7407].
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Genomic context

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Sequence:
NC_000913.3 (2816512..2816940, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glutamate--cysteine ligase Neighboring gene fructose-1-phosphate phosphatase YqaB Neighboring gene tRNA-Arg Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Construction of a contiguous 874-kb sequence of the Escherichia coli -K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features. Yamamoto Y, et al. DNA Res, 1997 Apr 28. PMID 9205837
  2. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
  3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DedA family protein YqaA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2816512..2816940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417174.1 DedA family protein YqaA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417174.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S0FP00
    Conserved Domains (1) summary
    COG1238
    Location:1 → 142
    YgaA; Uncharacterized membrane protein YqaA, SNARE-associated domain [Function unknown]
Nucleotide Protein
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