U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ydhU putative cytochrome YdhU [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945608, updated on 17-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
ydhU
Official Full Name
putative cytochrome YdhU
Primary source
ECOCYC:G6898
Locus tag
b1670
See related
ASAP:ABE-0005579
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1666
Summary
YdhU is a predicted cytochrome b-containing integral membrane protein. [More information is available at EcoCyc: G6898].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1749563..1750348, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene FAD/NAD(P) binding domain-containing protein YdhS Neighboring gene uncharacterized protein YdhT Neighboring gene putative 4Fe-4S ferredoxin-like protein YdhX Neighboring gene uncharacterized protein YdhW Neighboring gene putative oxidoreductase YdhV

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of the Escherichia coli K-12 ydhYVWXUT operon: regulation by FNR, NarL and NarP. Partridge JD, et al. Microbiology (Reading), 2008 Feb. PMID 18227264
  2. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
enables heme binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in respiratory electron transport chain IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
putative cytochrome YdhU

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1749563..1750348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416185.1 putative cytochrome YdhU [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416185.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A776LNS6
    Conserved Domains (1) summary
    PRK15006
    Location:1 → 261
    PRK15006; thiosulfate reductase cytochrome B subunit; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.