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yceJ putative cytochrome b561 YceJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945628, updated on 3-Dec-2024

Summary

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Official Symbol
yceJ
Official Full Name
putative cytochrome b561 YceJ
Primary source
ECOCYC:G6554
Locus tag
b1057
See related
ASAP:ABE-0003585
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1042
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Genomic context

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Sequence:
NC_000913.3 (1118480..1119046, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA U34 hydroxylase TrhO Neighboring gene protein YceI Neighboring gene DUF2770 domain-containing protein YceO Neighboring gene N-methyl-L-tryptophan oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article
  2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
enables heme binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in respiratory electron transport chain IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative cytochrome b561 YceJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1118480..1119046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415575.1 putative cytochrome b561 YceJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415575.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6D0IDQ3
    Conserved Domains (1) summary
    COG3038
    Location:3 → 183
    CybB; Cytochrome b561 [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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