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ymfK putative repressor protein YmfK [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945719, updated on 3-Dec-2024

Summary

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Official Symbol
ymfK
Official Full Name
putative repressor protein YmfK
Primary source
ECOCYC:G6589
Locus tag
b1145
See related
ASAP:ABE-0003851
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
cohE; ECK1131
Summary
CohE(YmfK) is a V4I variant of a putative CI-like repressor protein from Shigella flexneri bacteriophage V. [More information is available at EcoGene: EG14249].
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Genomic context

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Sequence:
NC_000913.3 (1202259..1202933, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative protein YmfH Neighboring gene uncharacterized protein YmfI Neighboring gene uncharacterized protein YmfJ Neighboring gene putative DNA-binding transcriptional regulator YmfT Neighboring gene uncharacterized protein YmfL Neighboring gene cell division inhibitor YmfM

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
  2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  3. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  4. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Baba T, et al. Mol Syst Biol, 2006. PMID 16738554, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
putative repressor protein YmfK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1202259..1202933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415663.1 putative repressor protein YmfK [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415663.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7D7KH05
    Conserved Domains (1) summary
    COG1974
    Location:8 → 219
    LexA; SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) [Transcription, Signal transduction mechanisms]
Nucleotide Protein
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