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pinE site-specific DNA recombinase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945721, updated on 3-Dec-2024

Summary

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Official Symbol
pinE
Official Full Name
site-specific DNA recombinase
Primary source
ECOCYC:EG10737
Locus tag
b1158
See related
ASAP:ABE-0003888
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1144; pin
Summary
Pin is a site-specific DNA recombinase that is a part of the e14 prophage element. [More information is available at EcoCyc: EG10737].
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Genomic context

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Sequence:
NC_000913.3 (1209685..1210239)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative tail fiber assembly protein TfaP Neighboring gene putative tail fiber assembly protein TfaE Neighboring gene pseudo Neighboring gene Type IV methyl-directed restriction enzyme EcoKMcrA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of the pin locus coding for a site-specific recombinase that causes flagellar-phase variation in Escherichia coli K-12. Enomoto M, et al. J Bacteriol, 1983 Nov. PMID 6355064, Free PMC Article
  2. DNA inversions in the chromosome of Escherichia coli and in bacteriophage Mu: relationship to other site-specific recombination systems. Plasterk RH, et al. Proc Natl Acad Sci U S A, 1983 Sep. PMID 6310572, Free PMC Article
  3. A Mu gin complementing function and an invertible DNA region in Escherichia coli K-12 are situated on the genetic element e14. van de Putte P, et al. J Bacteriol, 1984 May. PMID 6233259, Free PMC Article
  4. A gene for DNA invertase and an invertible DNA in Escherichia coli K-12. Kutsukake K, et al. Gene, 1985. PMID 3891522
  5. Identification of a novel genetic element in Escherichia coli K-12. Greener A, et al. J Bacteriol, 1980 Oct. PMID 6998954, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA strand exchange activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables DNA strand exchange activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA strand exchange activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables ligase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
  
involved_in DNA recombination IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within DNA recombination IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
site-specific DNA recombinase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1209685..1210239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415676.1 site-specific DNA recombinase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415676.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5YPR9
    Conserved Domains (2) summary
    cd03768
    Location:2 → 126
    SR_ResInv; Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and ...
    pfam02796
    Location:138 → 182
    HTH_7; Helix-turn-helix domain of resolvase
Nucleotide Protein
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