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ychN DsrE/F sulfur relay family protein YchN [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945794, updated on 3-Dec-2024

Summary

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Official Symbol
ychN
Official Full Name
DsrE/F sulfur relay family protein YchN
Primary source
ECOCYC:EG12404
Locus tag
b1219
See related
ASAP:ABE-0004091
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1213
Summary
Possibly involved in intracellular sulfur reduction (COG1553). [More information is available at EcoGene: EG12404]. A crystal structure of YchN has been determined at 2.8 resolution . [More information is available at EcoCyc: EG12404].
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Genomic context

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Sequence:
NC_000913.3 (1273246..1273599, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative cation transport regulator ChaB Neighboring gene glutathione-specific gamma-glutamylcyclotransferase Neighboring gene putative invasin YchO Neighboring gene DNA-binding transcriptional dual regulator NarL Neighboring gene sensor histidine kinase NarX

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of a conserved hypothetical protein from Escherichia coli. Shin DH, et al. J Struct Funct Genomics, 2002. PMID 12836674
  2. Proteomic analysis of protein-protein interactions within the Cysteine Sulfinate Desulfinase Fe-S cluster biogenesis system. Bolstad HM, et al. J Proteome Res, 2010 Oct 1. PMID 20734996, Free PMC Article
  3. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Numata T, et al. Structure, 2006 Feb. PMID 16472754
  4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables identical protein binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
part_of protein-containing complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DsrE/F sulfur relay family protein YchN

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1273246..1273599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415737.1 DsrE/F sulfur relay family protein YchN [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415737.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S0FWL0
    Conserved Domains (1) summary
    COG1553
    Location:2 → 117
    DsrE; Sulfur relay (sulfurtransferase) complex TusBCD TusD component, DsrE family [Inorganic ion transport and metabolism]
Nucleotide Protein
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