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oppF murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945818, updated on 3-Dec-2024

Summary

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Official Symbol
oppF
Official Full Name
murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF
Primary source
ECOCYC:EG10678
Locus tag
b1247
See related
ASAP:ABE-0004182
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1241
Summary
OppF is an ATP-binding component of the oligopeptide ABC transporter and the murein tripeptide ABC transporter. [More information is available at EcoCyc: EG10678].
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Genomic context

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Sequence:
NC_000913.3 (1305764..1306768)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB Neighboring gene murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppC Neighboring gene murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD Neighboring gene DUF440 domain-containing protein YciU Neighboring gene cardiolipin synthase A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and localization of the membrane-associated, ATP-binding subunit of the oligopeptide permease of Salmonella typhimurium. Gallagher MP, et al. Eur J Biochem, 1989 Mar 1. PMID 2651120
  2. The structural basis of sequence-independent peptide binding by OppA protein. Tame JR, et al. Science, 1994 Jun 10. PMID 8202710
  3. The periplasmic murein peptide-binding protein MppA is a negative regulator of multiple antibiotic resistance in Escherichia coli. Li H, et al. J Bacteriol, 1999 Aug. PMID 10438753, Free PMC Article
  4. Structure determination of OppA at 2.3 A resolution using multiple-wavelength anomalous dispersion methods. Glover ID, et al. Acta Crystallogr D Biol Crystallogr, 1995 Jan 1. PMID 15299334
  5. Turnover and recycling of the murein sacculus in oligopeptide permease-negative strains of Escherichia coli: indirect evidence for an alternative permease system and for a monolayered sacculus. Park JT. J Bacteriol, 1993 Jan. PMID 8416911, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding ISM
Inferred from Sequence Model
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables peptidoglycan peptide transmembrane transporter activity EXP
Inferred from Experiment
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligopeptide import across plasma membrane NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within peptidoglycan-associated peptide transport EXP
Inferred from Experiment
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in tripeptide import across plasma membrane NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF
NP_415763.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1305764..1306768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415763.1 murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415763.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6C9QIV9, A0A8S7RDN8
    Conserved Domains (1) summary
    PRK15079
    Location:4 → 334
    PRK15079; oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Nucleotide Protein
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