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yciC putative inner membrane protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945844, updated on 3-Dec-2024

Summary

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Official Symbol
yciC
Official Full Name
putative inner membrane protein
Primary source
ECOCYC:EG11123
Locus tag
b1255
See related
ASAP:ABE-0004204
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1249
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Genomic context

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Sequence:
NC_000913.3 (1312920..1313663, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene acyl-CoA thioesterase YciA Neighboring gene inner membrane protein Neighboring gene outer membrane protein W Neighboring gene DUF892 domain-containing protein YciE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution of the Escherichia coli chromosome. I. Analysis of structure and natural variation in a previously uncharacterized region between trp and tonB. Stoltzfus A, et al. Genetics, 1988 Oct. PMID 3058546, Free PMC Article
  2. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
  3. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
  4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative inner membrane protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1312920..1313663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415771.1 putative inner membrane protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415771.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A765T637
    Conserved Domains (1) summary
    PRK02868
    Location:4 → 247
    PRK02868; hypothetical protein; Provisional
Nucleotide Protein
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