U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ymjA DUF2543 domain-containing protein YmjA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945874, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
ymjA
Official Full Name
DUF2543 domain-containing protein YmjA
Primary source
ECOCYC:G6642
Locus tag
b1295
See related
ASAP:ABE-0004359
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1290
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1357423..1357668, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putrescine ABC exporter ATP binding protein SapD Neighboring gene putrescine ABC exporter membrane protein SapC Neighboring gene putrescine ABC exporter membrane subunit SapB Neighboring gene putative periplasmic binding protein SapA Neighboring gene putrescine:H(+) symporter PuuP Neighboring gene protein YmjE Neighboring gene glutamate-putrescine ligase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DUF2543 domain-containing protein YmjA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1357423..1357668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415811.1 DUF2543 domain-containing protein YmjA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415811.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1K5E7
    Conserved Domains (1) summary
    pfam10820
    Location:1 → 81
    DUF2543; Protein of unknown function (DUF2543)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.