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ykgJ putative metal-chelating domain-containing protein YkgJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945905, updated on 3-Dec-2024

Summary

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Official Symbol
ykgJ
Official Full Name
putative metal-chelating domain-containing protein YkgJ
Primary source
ECOCYC:G6159
Locus tag
b0288
See related
ASAP:ABE-0000997
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0287
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Genomic context

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Sequence:
NC_000913.3 (303853..304182, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase, FAD-binding subunit Neighboring gene aldehyde dehydrogenase, Fe-S subunit Neighboring gene DUF1440 domain-containing inner membrane protein YagU Neighboring gene putative fimbrial chaperone EcpE Neighboring gene fimbrial adhesin EcpD Neighboring gene putative fimbrial usher protein EcpC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative metal-chelating domain-containing protein YkgJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    303853..304182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414822.1 putative metal-chelating domain-containing protein YkgJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414822.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EG30
    Conserved Domains (1) summary
    COG0727
    Location:1 → 109
    YkgJ; Fe-S-cluster containining protein [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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