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yncJ DUF2554 domain-containing protein YncJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945990, updated on 3-Dec-2024

Summary

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Official Symbol
yncJ
Official Full Name
DUF2554 domain-containing protein YncJ
Primary source
ECOCYC:G6747
Locus tag
b1436
See related
ASAP:ABE-0004789
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1430
Summary
First 22 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG14300].
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Genomic context

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Sequence:
NC_000913.3 (1508834..1509064, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator SutR Neighboring gene 23S rRNA 5-hydroxycytidine C2501 synthase Neighboring gene mRNA interferase toxin HicA Neighboring gene antitoxin of the HicA-HicB toxin-antitoxin system/ DNA-binding transcriptional repressor HicB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptional response of Escherichia coli to external copper. Yamamoto K, et al. Mol Microbiol, 2005 Apr. PMID 15773991
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DUF2554 domain-containing protein YncJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1508834..1509064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415953.1 DUF2554 domain-containing protein YncJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415953.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376K114
    Conserved Domains (1) summary
    pfam10829
    Location:1 → 76
    DUF2554; Protein of unknown function (DUF2554)
Nucleotide Protein
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