U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mcbR DNA-binding transcriptional dual regulator McbR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946014, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
mcbR
Official Full Name
DNA-binding transcriptional dual regulator McbR
Primary source
ECOCYC:G6761
Locus tag
b1450
See related
ASAP:ABE-0004837
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1444; yncC
Summary
Salmonella ortholog regulated by RpoS. [More information is available at EcoGene: EG13773]. The yncC gene of Salmonella enterica serovar Typhimurium shows regulation that is RpoS dependent and growth phase dependent . [More information is available at EcoCyc: G6761].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1520262..1520927)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein YdcZ Neighboring gene L-amino acid N-acyltransferase Neighboring gene NADPH-dependent curcumin/dihydrocurcumin reductase Neighboring gene putative TonB-dependent outer membrane receptor Neighboring gene PQQ-like domain-containing protein YncE

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Chapter 1: Variation in form and function the helix-turn-helix regulators of the GntR superfamily. Hoskisson PA, et al. Adv Appl Microbiol, 2009. PMID 19729089
  2. The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli. Xu Y, et al. J Biol Chem, 2001 May 18. PMID 11279025
  3. Identification of RpoS (sigma(S))-regulated genes in Salmonella enterica serovar typhimurium. Ibanez-Ruiz M, et al. J Bacteriol, 2000 Oct. PMID 11004173, Free PMC Article
  4. Low molecular weight proteins: a challenge for post-genomic research. Rudd KE, et al. Electrophoresis, 1998 Apr. PMID 9588799
  5. DNA microarray-based identification of genes controlled by autoinducer 2-stimulated quorum sensing in Escherichia coli. DeLisa MP, et al. J Bacteriol, 2001 Sep. PMID 11514505, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. YncC inhibits colanic acid overproduction and thereby inhibits mucoidy by repressing expression of periplasmic protein YbiM.
    Title: Escherichia coli transcription factor YncC (McbR) regulates colanic acid and biofilm formation by repressing expression of periplasmic protein YbiM (McbA).
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
DNA-binding transcriptional dual regulator McbR

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1520262..1520927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415967.2 DNA-binding transcriptional dual regulator McbR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415967.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377E4S0
    Conserved Domains (1) summary
    PRK11414
    Location:1 → 221
    PRK11414; GntR family transcriptional regulator
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.