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essQ putative prophage lysis protein EssQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946093, updated on 3-Dec-2024

Summary

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Official Symbol
essQ
Official Full Name
putative prophage lysis protein EssQ
Primary source
ECOCYC:G6829
Locus tag
b1556
See related
ASAP:ABE-0005197
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1550; ydfS
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Genomic context

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Sequence:
NC_000913.3 (1640370..1640585, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2514 domain-containing protein RzpQ Neighboring gene putative lipoprotein RzoQ Neighboring gene putative lysozyme Neighboring gene protein YdfR Neighboring gene putative zinc-binding protein YnfU Neighboring gene cold shock-like protein CspB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  3. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables pore-forming activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in killing of cells of another organism IEA
Inferred from Electronic Annotation
more info
  
involved_in symbiont-mediated killing of host cell IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
putative prophage lysis protein EssQ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1640370..1640585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416074.4 putative prophage lysis protein EssQ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416074.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1IYB1, A0A376VJ22
    Conserved Domains (1) summary
    pfam04971
    Location:5 → 68
    Phage_holin_2_1; Bacteriophage P21 holin S
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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