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rsxB SoxR [2Fe-2S] reducing system protein RsxB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946146, updated on 3-Dec-2024

Summary

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Official Symbol
rsxB
Official Full Name
SoxR [2Fe-2S] reducing system protein RsxB
Primary source
ECOCYC:G6872
Locus tag
b1628
See related
ASAP:ABE-0005452
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1624; ydgM
Summary
RsxB has an N-terminal hydrophobic region and two ferredoxin-like motifs . [More information is available at EcoCyc: G6872].
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Genomic context

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Sequence:
NC_000913.3 (1706348..1706926)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene H-NS- and StpA-binding protein Neighboring gene DUF2569 domain-containing inner membrane protein YdgK Neighboring gene SoxR [2Fe-2S] reducing system protein RsxA Neighboring gene SoxR [2Fe-2S] reducing system protein RsxC Neighboring gene SoxR [2Fe-2S] reducing system protein RsxD Neighboring gene SoxR [2Fe-2S] reducing system protein RsxG

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of components of a reducing system for SoxR in the cytoplasmic membrane of Escherichia coli. Lee KL, et al. J Microbiol, 2022 Apr. PMID 35344189
  2. The genes encoding endonuclease VIII and endonuclease III in Escherichia coli are transcribed as the terminal genes in operons. Gifford CM, et al. Nucleic Acids Res, 2000 Feb 1. PMID 10637328, Free PMC Article
  3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  4. Overexpression in Escherichia coli of the rnf genes from Rhodobacter capsulatus--characterization of two membrane-bound iron-sulfur proteins. Jouanneau Y, et al. Eur J Biochem, 1998 Jan 15. PMID 9492268
  5. Membrane localization, topology, and mutual stabilization of the rnfABC gene products in Rhodobacter capsulatus and implications for a new family of energy-coupling NADH oxidoreductases. Kumagai H, et al. Biochemistry, 1997 May 6. PMID 9154934

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
contributes_to oxidoreductase activity, acting on NAD(P)H IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in electron transport chain IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of oxidoreductase complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
part_of plasma membrane protein complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
SoxR [2Fe-2S] reducing system protein RsxB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1706348..1706926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416145.1 SoxR [2Fe-2S] reducing system protein RsxB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416145.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A444R220
    Conserved Domains (1) summary
    PRK05113
    Location:1 → 192
    PRK05113; electron transport complex protein RnfB; Provisional
Nucleotide Protein
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