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ydhL DUF1289 domain-containing protein YdhL [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946168, updated on 17-Dec-2024

Summary

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Official Symbol
ydhL
Official Full Name
DUF1289 domain-containing protein YdhL
Primary source
ECOCYC:G6888
Locus tag
b1648
See related
ASAP:ABE-0005510
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1644
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Genomic context

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Sequence:
NC_000913.3 (1725681..1725920, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene superoxide dismutase (Cu-Zn) Neighboring gene putative oxidoreductase YdhF Neighboring gene DNA-binding transcriptional repressor NemR Neighboring gene N-ethylmaleimide reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-Wide Screening of Oxidizing Agent Resistance Genes in Escherichia coli. Chen H, et al. Antioxidants (Basel), 2021 May 27. PMID 34072091, Free PMC Article
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within response to hydrogen peroxide IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
DUF1289 domain-containing protein YdhL

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1725681..1725920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416165.2 DUF1289 domain-containing protein YdhL [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416165.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6QJP8
    Conserved Domains (1) summary
    COG3313
    Location:5 → 78
    YdhL; Predicted Fe-S protein YdhL, DUF1289 family [General function prediction only]
Nucleotide Protein
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