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yneE PF01062 family inner membrane protein YneE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946188, updated on 3-Dec-2024

Summary

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Official Symbol
yneE
Official Full Name
PF01062 family inner membrane protein YneE
Primary source
ECOCYC:G6807
Locus tag
b1520
See related
ASAP:ABE-0005072
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1513
Summary
A yneE mutation leads to a defect in swarming, but not swimming motility . [More information is available at EcoCyc: G6807].
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Genomic context

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Sequence:
NC_000913.3 (1608108..1609022, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Neighboring gene trans-aconitate 2-methyltransferase Neighboring gene tagaturonate reductase Neighboring gene putative diguanylate cyclase DgcF

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. luxS-dependent gene regulation in Escherichia coli K-12 revealed by genomic expression profiling. Wang L, et al. J Bacteriol, 2005 Dec. PMID 16321939, Free PMC Article
  2. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
  3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PF01062 family inner membrane protein YneE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1608108..1609022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416037.2 PF01062 family inner membrane protein YneE [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416037.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3L5H7V4
    Conserved Domains (1) summary
    COG3781
    Location:1 → 304
    YneE; Predicted membrane chloride channel, bestrophin family [Inorganic ion transport and metabolism]
Nucleotide Protein
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