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ynjI DUF1266 domain-containing protein YnjI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946239, updated on 3-Dec-2024

Summary

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Official Symbol
ynjI
Official Full Name
DUF1266 domain-containing protein YnjI
Primary source
ECOCYC:G6956
Locus tag
b1762
See related
ASAP:ABE-0005867
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1760
Summary
YnjI is an inner membrane protein with two predicted transmembrane domains. [More information is available at EcoCyc: G6956].
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Genomic context

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Sequence:
NC_000913.3 (1843831..1844871, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 5-hydroxy-CTP diphosphatase Neighboring gene DUF1496 domain-containing protein YnjH Neighboring gene glutamate dehydrogenase Neighboring gene DNA topoisomerase III Neighboring gene selenide, water dikinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and DNA sequence analysis of Escherichia coli topB, the gene encoding topoisomerase III. DiGate RJ, et al. J Biol Chem, 1989 Oct 25. PMID 2553698
  2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DUF1266 domain-containing protein YnjI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1843831..1844871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416276.4 DUF1266 domain-containing protein YnjI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416276.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6BL58
    Conserved Domains (1) summary
    PRK11380
    Location:1 → 346
    PRK11380; hypothetical protein; Provisional
Nucleotide Protein
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