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ynjC putative ABC transporter membrane subunit YnjC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946273, updated on 17-Dec-2024

Summary

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Official Symbol
ynjC
Official Full Name
putative ABC transporter membrane subunit YnjC
Primary source
ECOCYC:G6950
Locus tag
b1755
See related
ASAP:ABE-0005843
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1753
Summary
YnjC is a membrane component of a predicted metabolite uptake ABC transporter. [More information is available at EcoCyc: G6950].
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Genomic context

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Sequence:
NC_000913.3 (1837212..1838747)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DedA family protein YdjZ Neighboring gene AhpD-like domain-containing protein YnjA Neighboring gene putative ABC transporter periplasmic binding protein YnjB Neighboring gene putative ABC transporter ATP-binding protein YnjD Neighboring gene molybdopterin synthase sulfurtransferase Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnjF

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ATP-binding cassette transporters in Escherichia coli. Moussatova A, et al. Biochim Biophys Acta, 2008 Sep. PMID 18634750
  2. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
  3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  5. The Transporter Classification Database (TCDB): recent advances. Saier MH Jr, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26546518, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex IC
Inferred by Curator
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
putative ABC transporter membrane subunit YnjC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1837212..1838747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416269.4 putative ABC transporter membrane subunit YnjC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416269.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EFN5
    Conserved Domains (1) summary
    COG4135
    Location:14 → 511
    YnjC; ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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