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pepT peptidase T [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946333, updated on 3-Dec-2024

Summary

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Official Symbol
pepT
Official Full Name
peptidase T
Primary source
ECOCYC:EG11549
Locus tag
b1127
See related
ASAP:ABE-0003800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1113
Summary
HT_Cmplx34_Cyt: [More information is available at EcoGene: EG11549]. Peptidase T is a tripeptidase that is upregulated in sessile bacteria growing in biofilms . [More information is available at EcoCyc: EG11549].
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Genomic context

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Sequence:
NC_000913.3 (1185844..1187070)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene spermidine preferential ABC transporter membrane subunit PotC Neighboring gene spermidine preferential ABC transporter membrane subunit PotB Neighboring gene spermidine preferential ABC transporter ATP binding subunit Neighboring gene 50S ribosomal protein L16-arginine 3-hydroxylase Neighboring gene sensor histidine kinase PhoQ Neighboring gene DNA-binding transcriptional dual regulator PhoP

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of peptidase T from Salmonella typhimurium. Håkansson K, et al. Eur J Biochem, 2002 Jan. PMID 11856302
  2. Tripeptide-specific aminopeptidase from Escherichia coli AJ005. Hermsdorf CL. Biochemistry, 1978 Aug 8. PMID 356879
  3. Soluble tri- and dipeptidases in Escherichia coli K-12+. Simmonds S, et al. Biochemistry, 1976 Jan 27. PMID 764862
  4. Peptidases in Escherichia coli K-12 capable of cleaving lysine homopeptides. Sussman AJ, et al. J Biol Chem, 1970 Dec 25. PMID 4991642
  5. Crystallization of peptidase T from Salmonella typhimurium. Håkansson K, et al. Acta Crystallogr D Biol Crystallogr, 2000 Jul. PMID 10930847

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables tripeptide aminopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables tripeptide aminopeptidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables tripeptide aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in peptide catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within peptide metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in peptide metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
peptidase T
NP_415645.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1185844..1187070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415645.1 peptidase T [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415645.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1V2GE95, A0A2X1PLI6, A0A3R0MPJ9
    Conserved Domains (1) summary
    PRK05469
    Location:1 → 408
    PRK05469; tripeptide aminopeptidase PepT
Nucleotide Protein
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