U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

yedJ putative HD superfamily phosphohydrolase YedJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946478, updated on 17-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
yedJ
Official Full Name
putative HD superfamily phosphohydrolase YedJ
Primary source
ECOCYC:EG12710
Locus tag
b1962
See related
ASAP:ABE-0006512
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1960
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (2032384..2033079, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transporter YedA Neighboring gene DNA mismatch endonuclease Vsr Neighboring gene DNA-cytosine methyltransferase Neighboring gene cell division protein DrpB Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Nucleotide sequence of the dcm locus of Escherichia coli K12. Hanck T, et al. Nucleic Acids Res, 1989 Jul 25. PMID 2527357, Free PMC Article
  2. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
  3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
putative HD superfamily phosphohydrolase YedJ

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2032384..2033079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416471.1 putative HD superfamily phosphohydrolase YedJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416471.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9AI23, A0A8S7ENX2
    Conserved Domains (1) summary
    PRK10119
    Location:1 → 231
    PRK10119; putative hydrolase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.