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yeeN putative transcriptional regulator YeeN [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946493, updated on 3-Dec-2024

Summary

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Official Symbol
yeeN
Official Full Name
putative transcriptional regulator YeeN
Primary source
ECOCYC:G7068
Locus tag
b1983
See related
ASAP:ABE-0006582
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1978
Summary
YeeN deletion confers cold-sensitive growth, Dassain(1999). [More information is available at EcoGene: EG13382]. In a study of the Escherichia coli complexome, YeeN was found in a cytoplasmic complex together with YbbN and YeeZ . [More information is available at EcoCyc: G7068].
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Genomic context

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Sequence:
NC_000913.3 (2056858..2057574)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene shikimate:H(+) symporter Neighboring gene AMP nucleosidase Neighboring gene tRNA-Asn Neighboring gene FMN/FAD exporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new essential gene of the 'minimal genome' affecting cell division. Dassain M, et al. Biochimie, 1999 Aug-Sep. PMID 10572302
  2. The diversity of lysine-acetylated proteins in Escherichia coli. Yu BJ, et al. J Microbiol Biotechnol, 2008 Sep. PMID 18852508
  3. A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Lasserre JP, et al. Electrophoresis, 2006 Aug. PMID 16858726
  4. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043
  5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
putative transcriptional regulator YeeN

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2056858..2057574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416490.1 putative transcriptional regulator YeeN [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416490.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377BBA6
    Conserved Domains (1) summary
    PRK12378
    Location:1 → 236
    PRK12378; YebC/PmpR family DNA-binding transcriptional regulator
Nucleotide Protein
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