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yeeJ inverse autotransporter adhesin [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946498, updated on 3-Dec-2024

Summary

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Official Symbol
yeeJ
Official Full Name
inverse autotransporter adhesin
Primary source
ECOCYC:G7064
Locus tag
b1978
See related
ASAP:ABE-0006563
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1974
Summary
YeeJ contains 13 Big-1 (Bacterial Ig-like) repeate domains from residues 739-2053. [More information is available at EcoGene: EG13378]. YeeJ is a potential adhesin. [More information is available at EcoCyc: G7064].
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Genomic context

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Sequence:
NC_000913.3 (2044938..2052014)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene Mlc titration factor Neighboring gene tRNA-Asn Neighboring gene pseudo Neighboring gene shikimate:H(+) symporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Assembly of the Inverse Autotransporter Protein YeeJ is Driven by its C-terminal β-strand. Schreiber S, et al. J Mol Biol, 2024 Oct 15. PMID 39173735
  2. YeeJ is an inverse autotransporter from Escherichia coli that binds to peptidoglycan and promotes biofilm formation. Martinez-Gil M, et al. Sci Rep, 2017 Sep 12. PMID 28900103, Free PMC Article
  3. Combined inactivation and expression strategy to study gene function under physiological conditions: application to identification of new Escherichia coli adhesins. Roux A, et al. J Bacteriol, 2005 Feb. PMID 15659678, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The Assembly of the Inverse Autotransporter Protein YeeJ is Driven by its C-terminal beta-strand.
    Title: The Assembly of the Inverse Autotransporter Protein YeeJ is Driven by its C-terminal β-strand.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell adhesion involved in biofilm formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cell adhesion involved in single-species biofilm formation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cell outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cell outer membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
inverse autotransporter adhesin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2044938..2052014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416485.4 inverse autotransporter adhesin [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416485.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A895NR20
    Conserved Domains (3) summary
    smart00634
    Location:1457 → 1551
    BID_1; Bacterial Ig-like domain (group 1)
    pfam09134
    Location:535 → 624
    Invasin_D3; Invasin, domain 3
    pfam11924
    Location:143 → 419
    IAT_beta; Inverse autotransporter, beta-domain
Nucleotide Protein
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