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ydhK putative transporter YdhK [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946528, updated on 3-Dec-2024

Summary

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Official Symbol
ydhK
Official Full Name
putative transporter YdhK
Primary source
ECOCYC:G6885
Locus tag
b1645
See related
ASAP:ABE-0005503
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1641
Summary
YdhK is similar to B. cepacia fusaric acid resistance protein FusC. [More information is available at EcoGene: EG13945].
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Genomic context

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Sequence:
NC_000913.3 (1722121..1724133)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1656 domain-containing protein YdhI Neighboring gene putative membrane fusion protein YdhJ Neighboring gene superoxide dismutase (Cu-Zn) Neighboring gene putative oxidoreductase YdhF

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transporter YdhK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1722121..1724133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416162.1 putative transporter YdhK [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416162.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376WZQ8, A0A8T5Y7P5
    Conserved Domains (1) summary
    pfam04632
    Location:21 → 663
    FUSC; Fusaric acid resistance protein family
Nucleotide Protein
Heading Accession and Version

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