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ybgQ putative fimbrial usher protein YbgQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946537, updated on 3-Dec-2024

Summary

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Official Symbol
ybgQ
Official Full Name
putative fimbrial usher protein YbgQ
Primary source
ECOCYC:G6387
Locus tag
b0718
See related
ASAP:ABE-0002446
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0707
Summary
FimD family. [More information is available at EcoGene: EG13313].
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Genomic context

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Sequence:
NC_000913.3 (749722..752169, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene endonuclease VIII Neighboring gene putative regulator Neighboring gene putative fimbrial protein YbgO Neighboring gene putative fimbrial chaperone YbgP Neighboring gene putative fimbrial protein YbgD Neighboring gene citrate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for a novel domain of bacterial outer membrane ushers. Capitani G, et al. Proteins, 2006 Dec 1. PMID 17066380
  2. Bacterial outer membrane ushers contain distinct targeting and assembly domains for pilus biogenesis. Thanassi DG, et al. J Bacteriol, 2002 Nov. PMID 12399496, Free PMC Article
  3. Analysis of the requirements for pilus biogenesis at the outer membrane usher and the function of the usher C-terminus. So SS, et al. Mol Microbiol, 2006 Apr. PMID 16573686
  4. The outer membrane usher forms a twin-pore secretion complex. Li H, et al. J Mol Biol, 2004 Dec 10. PMID 15561151
  5. Chaperone-subunit-usher interactions required for donor strand exchange during bacterial pilus assembly. Barnhart MM, et al. J Bacteriol, 2003 May. PMID 12700251, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables fimbrial usher porin activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables fimbrial usher porin activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in pilus assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in pilus assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cell outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cell outer membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative fimbrial usher protein YbgQ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    749722..752169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415246.2 putative fimbrial usher protein YbgQ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415246.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024L592, A0A236PGZ6
    Conserved Domains (1) summary
    COG3188
    Location:1 → 815
    FimD; Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]
Nucleotide Protein
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