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yehQ SWIM zinc finger domains-containing protein YehQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946654, updated on 3-Dec-2024

Summary

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Official Symbol
yehQ
Official Full Name
SWIM zinc finger domains-containing protein YehQ
Primary source
ECOCYC:EG12003
Locus tag
b2122
See related
ASAP:ABE-0007015
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2114
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Genomic context

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Sequence:
NC_000913.3 (2209100..2210944)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative AAA(+) MoxR family ATPase YehL Neighboring gene uncharacterized protein YehM Neighboring gene VWA domain-containing protein YehP Neighboring gene DUF1307 domain-containing lipoprotein YehR Neighboring gene DUF1456 domain-containing protein YehS

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
  2. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
SWIM zinc finger domains-containing protein YehQ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2209100..2210944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009518800.1 SWIM zinc finger domains-containing protein YehQ [Escherichia coli str. K-12 substr. MG1655]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1MXP1
    Conserved Domains (1) summary
    cl00467
    Location:490 → 527
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
Nucleotide Protein
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