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rpnE inactive recombination-promoting nuclease-like protein RpnE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946737, updated on 3-Dec-2024

Summary

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Official Symbol
rpnE
Official Full Name
inactive recombination-promoting nuclease-like protein RpnE
Primary source
ECOCYC:EG12323
Locus tag
b2244
See related
ASAP:ABE-0007429
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2236; yfaD
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Genomic context

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Sequence:
NC_000913.3 (2356904..2357803)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene anaerobic glycerol-3-phosphate dehydrogenase subunit A Neighboring gene anaerobic glycerol-3-phosphate dehydrogenase subunit B Neighboring gene anaerobic glycerol-3-phosphate dehydrogenase subunit C Neighboring gene pseudo Neighboring gene 2-keto-3-deoxy-L-rhamnonate aldolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
  2. Nucleotide sequence and gene-polypeptide relationships of the glpABC operon encoding the anaerobic sn-glycerol-3-phosphate dehydrogenase of Escherichia coli K-12. Cole ST, et al. J Bacteriol, 1988 Jun. PMID 3286606, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
inactive recombination-promoting nuclease-like protein RpnE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2356904..2357803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416747.1 inactive recombination-promoting nuclease-like protein RpnE [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416747.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T3UMG6
    Conserved Domains (1) summary
    PRK09956
    Location:1 → 299
    PRK09956; ISNCY family transposase
Nucleotide Protein
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