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rpnB recombination-promoting nuclease RpnB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946787, updated on 17-Dec-2024

Summary

Official Symbol
rpnB
Official Full Name
recombination-promoting nuclease RpnB
Primary source
ECOCYC:G7197
Locus tag
b2305
See related
ASAP:ABE-0007607
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2299; yfcI
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Genomic context

Sequence:
NC_000913.3 (2422649..2423539, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene dihydroneopterin triphosphate 2'-epimerase Neighboring gene epimerase family protein YfcH Neighboring gene lysine/arginine/ornithine ABC transporter/histidine ABC transporter, ATP binding subunit Neighboring gene lysine/arginine/ornithine ABC transporter/histidine ABC transporter, membrane subunit HisM Neighboring gene lysine/arginine/ornithine ABC transporter/histidine ABC transporter, membrane subunit HisQ

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables double-stranded DNA endonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA recombination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in DNA recombination IDA
Inferred from Direct Assay
more info
PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within DNA recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
recombination-promoting nuclease RpnB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2422649..2423539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416808.1 recombination-promoting nuclease RpnB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416808.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376FWX4
    Conserved Domains (1) summary
    PRK09956
    Location:1296
    PRK09956; ISNCY family transposase