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yfcR putative fimbrial protein YfcR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946818, updated on 3-Dec-2024

Summary

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Official Symbol
yfcR
Official Full Name
putative fimbrial protein YfcR
Primary source
ECOCYC:G7206
Locus tag
b2335
See related
ASAP:ABE-0007707
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2329
Summary
One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG14121].
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Genomic context

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Sequence:
NC_000913.3 (2451072..2451584, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2544 domain-containing protein YfcO Neighboring gene putative fimbrial protein YfcP Neighboring gene putative fimbrial protein YfcQ Neighboring gene putative fimbrial chaperone YfcS Neighboring gene pseudo Neighboring gene putative fimbrial protein YfcV

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
  2. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
  3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell adhesion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cell adhesion involved in single-species biofilm formation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in pilus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in pilus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative fimbrial protein YfcR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2451072..2451584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416838.1 putative fimbrial protein YfcR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416838.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D5NT28
    Conserved Domains (1) summary
    cl01416
    Location:20 → 170
    Fimbrial; Fimbrial protein
Nucleotide Protein
Heading Accession and Version

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