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yebY DUF2511 domain-containing protein YebY [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947014, updated on 3-Dec-2024

Summary

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Official Symbol
yebY
Official Full Name
DUF2511 domain-containing protein YebY
Primary source
ECOCYC:G7012
Locus tag
b1839
See related
ASAP:ABE-0006118
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1840
Summary
Upregulated by GSNO in defined medium (aerobic). [More information is available at EcoGene: EG14027].
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Genomic context

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Sequence:
NC_000913.3 (1923365..1923706, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphoprotein phosphatase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CopD family protein Neighboring gene copper-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The copper-linked Escherichia coli AZY operon: Structure, metal binding, and a possible physiological role in copper delivery. Hadley RC, et al. J Biol Chem, 2022 Jan. PMID 34822841, Free PMC Article
  2. Transcriptional responses of Escherichia coli to S-nitrosoglutathione under defined chemostat conditions reveal major changes in methionine biosynthesis. Flatley J, et al. J Biol Chem, 2005 Mar 18. PMID 15647275
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in copper ion homeostasis IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DUF2511 domain-containing protein YebY

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1923365..1923706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416353.1 DUF2511 domain-containing protein YebY [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416353.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A094WEY7
    Conserved Domains (1) summary
    pfam10709
    Location:26 → 113
    DUF2511; Protein of unknown function (DUF2511)
Nucleotide Protein
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