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yfiL DUF2799 domain-containing lipoprotein YfiL [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947106, updated on 3-Dec-2024

Summary

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Official Symbol
yfiL
Official Full Name
DUF2799 domain-containing lipoprotein YfiL
Primary source
ECOCYC:EG12446
Locus tag
b2602
See related
ASAP:ABE-0008565
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2599
Summary
First 16 aa are a type II signal peptide. [More information is available at EcoGene: EG12446].
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Genomic context

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Sequence:
NC_000913.3 (2741360..2741725)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene fused chorismate mutase/prephenate dehydrogenase Neighboring gene 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive Neighboring gene DUF4154 domain-containing protein YfiR Neighboring gene diguanylate cyclase DgcN Neighboring gene lipoprotein YfiB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence and transcription of the phenylalanine and tyrosine operons of Escherichia coli K12. Hudson GS, et al. J Mol Biol, 1984 Dec 25. PMID 6396419
  2. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  3. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DUF2799 domain-containing lipoprotein YfiL

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2741360..2741725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417093.2 DUF2799 domain-containing lipoprotein YfiL [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417093.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J1ZFR9, A0A7U9LV63, A0A7U9NZA6, A0AAN1VLD9, W1WSQ3
    Conserved Domains (1) summary
    PRK11443
    Location:2 → 121
    PRK11443; lipoprotein; Provisional
Nucleotide Protein
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