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yfjZ putative antitoxin of the YpjF-YfjZ toxin-antitoxin system [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947123, updated on 3-Dec-2024

Summary

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Official Symbol
yfjZ
Official Full Name
putative antitoxin of the YpjF-YfjZ toxin-antitoxin system
Primary source
ECOCYC:G7380
Locus tag
b2645
See related
ASAP:ABE-0008709
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2642
Summary
YfjZ mutant slightly NO sensitive. [More information is available at EcoGene: EG13212]. YfjZ is encoded upstream of the toxin YpjF and may function as its antitoxin. [More information is available at EcoCyc: G7380].
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Genomic context

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Sequence:
NC_000913.3 (2777115..2777432)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene RadC-like JAB domain-containing protein YfjY Neighboring gene DUF987 domain-containing protein YpjJ Neighboring gene toxin of the YpjF-YfjZ toxin-antitoxin system Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. New genes implicated in the protection of anaerobically grown Escherichia coli against nitric oxide. Justino MC, et al. J Biol Chem, 2005 Jan 28. PMID 15546870
  2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  3. A novel family of Escherichia coli toxin-antitoxin gene pairs. Brown JM, et al. J Bacteriol, 2003 Nov. PMID 14594833, Free PMC Article
  4. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in positive regulation of cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative antitoxin of the YpjF-YfjZ toxin-antitoxin system

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2777115..2777432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417132.1 putative antitoxin of the YpjF-YfjZ toxin-antitoxin system [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417132.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377C5V3
    Conserved Domains (1) summary
    pfam06154
    Location:5 → 104
    CbeA_antitoxin; type IV, cytoskeleton bundling-enhancing factor A
Nucleotide Protein
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