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yqfB N(4)-acetylcytidine amidohydrolase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947380, updated on 17-Dec-2024

Summary

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Official Symbol
yqfB
Official Full Name
N(4)-acetylcytidine amidohydrolase
Primary source
ECOCYC:G7513
Locus tag
b2900
See related
ASAP:ABE-0009518
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2895
Summary
A solution structure of YqfB has been determined . [More information is available at EcoCyc: G7513].
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Genomic context

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Sequence:
NC_000913.3 (3043312..3043623, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene folate-binding protein Neighboring gene hemolysin-III family protein YqfA Neighboring gene 6-phospho-beta-glucosidase A Neighboring gene putative oxidoreductase YgfF

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. YqfB protein from Escherichia coli: an atypical amidohydrolase active towards N(4)-acylcytosine derivatives. Stanislauskienė R, et al. Sci Rep, 2020 Jan 21. PMID 31964920, Free PMC Article
  2. G-matrix Fourier transform NOESY-based protocol for high-quality protein structure determination. Shen Y, et al. J Am Chem Soc, 2005 Jun 29. PMID 15969587
  3. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables N4-acetylcytidine amidohydrolase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables N4-acetylcytidine amidohydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within pyrimidine nucleoside catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
N(4)-acetylcytidine amidohydrolase
NP_417376.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3043312..3043623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417376.1 N(4)-acetylcytidine amidohydrolase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417376.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1PQU7
    Conserved Domains (1) summary
    PRK04980
    Location:2 → 103
    PRK04980; hypothetical protein; Provisional
Nucleotide Protein
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