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yadI putative PTS enzyme IIA component YadI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947397, updated on 3-Dec-2024

Summary

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Official Symbol
yadI
Official Full Name
putative PTS enzyme IIA component YadI
Primary source
ECOCYC:EG12322
Locus tag
b0129
See related
ASAP:ABE-0000453
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
agaX; ECK0128
Summary
YadI was propose to be the IIA(Aga), but the real EnzymeIIA(Aga) is deleted from Escherichia coli K12. [More information is available at EcoGene: EG12322]. AgaX is the Enzyme IIA domain of a predicted N-acetylgalactosamine-transporting PEP-dependent phosphotransferase system. [More information is available at EcoCyc: EG12322].
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Genomic context

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Sequence:
NC_000913.3 (144577..145017)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene carbonic anhydrase 2 Neighboring gene putative ABC transporter ATP-binding protein YadG Neighboring gene putative ABC transporter membrane subunit YadH Neighboring gene putative polysaccharide deacetylase lipoprotein YadE Neighboring gene aspartate 1-decarboxylase proenzyme

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
part_of transmembrane transporter complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative PTS enzyme IIA component YadI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    144577..145017
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414671.1 putative PTS enzyme IIA component YadI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414671.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7D7PIQ1
    Conserved Domains (1) summary
    COG2893
    Location:1 → 141
    ManX; Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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