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yggI protein YggI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947443, updated on 17-Dec-2024

Summary

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Official Symbol
yggI
Official Full Name
protein YggI
Primary source
ECOCYC:EG12122
Locus tag
b2944
See related
ASAP:ABE-0009657
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2939; sprT
Summary
YggI was named SprT and described as a regulator of the bolA gene in stationary phase in GenBank D83644: [More information is available at EcoGene: EG12122].
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Genomic context

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Sequence:
NC_000913.3 (3089755..3090252)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene methionine adenosyltransferase Neighboring gene galactose:H(+) symporter Neighboring gene DNA-specific endonuclease I Neighboring gene 16S rRNA m(3)U1498 methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Location of the endA gene coding for endonuclease I on the physical map of the Escherichia coli K-12 chromosome. Jekel M, et al. J Bacteriol, 1994 Mar. PMID 8113204, Free PMC Article
  2. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein YggI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3089755..3090252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417419.1 protein YggI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417419.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EF06
    Conserved Domains (1) summary
    PRK04860
    Location:10 → 165
    PRK04860; SprT family zinc-dependent metalloprotease
Nucleotide Protein
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