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yqgA DUF554 domain-containing protein YqgA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947462, updated on 3-Dec-2024

Summary

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Official Symbol
yqgA
Official Full Name
DUF554 domain-containing protein YqgA
Primary source
ECOCYC:G7534
Locus tag
b2966
See related
ASAP:ABE-0009736
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2961
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Genomic context

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Sequence:
NC_000913.3 (3109553..3110260)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene constitutive ornithine decarboxylase Neighboring gene protein YqgH Neighboring gene tRNA-Phe Neighboring gene putative type II secretion system M-type protein YghD

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
  2. Global gene expression profiling of asymptomatic bacteriuria Escherichia coli during biofilm growth in human urine. Hancock V, et al. Infect Immun, 2007 Feb. PMID 17145952, Free PMC Article
  3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DUF554 domain-containing protein YqgA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3109553..3110260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417441.1 DUF554 domain-containing protein YqgA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417441.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7IMF8
    Conserved Domains (1) summary
    COG1811
    Location:1 → 235
    YqgA; Uncharacterized membrane protein YqgA, affects biofilm formation [Function unknown]
Nucleotide Protein
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