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hofB T2SSE family protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947481, updated on 3-Dec-2024

Summary

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Official Symbol
hofB
Official Full Name
T2SSE family protein
Primary source
ECOCYC:EG12106
Locus tag
b0107
See related
ASAP:ABE-0000370
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0106; hopB
Summary
A hopB mutant shows defects in plasmid replication and maintenance . [More information is available at EcoCyc: EG12106].
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Genomic context

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Sequence:
NC_000913.3 (115714..117099, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YacM Neighboring gene GMP reductase Neighboring gene inner membrane protein HofC Neighboring gene prepilin-type N-terminal cleavage/methylation domain-containing protein PpdD Neighboring gene quinolinate phosphoribosyltransferase (decarboxylating)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of gyrB mutants of Escherichia coli that are defective in partitioning of mini-F plasmids. Ogura T, et al. J Bacteriol, 1990 Mar. PMID 2155204, Free PMC Article
  2. Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli. Niki H, et al. J Bacteriol, 1988 Nov. PMID 3053654, Free PMC Article
  3. PpdD type IV pilin of Escherichia coli K-12 can Be assembled into pili in Pseudomonas aeruginosa. Sauvonnet N, et al. J Bacteriol, 2000 Feb. PMID 10633126, Free PMC Article
  4. Escherichia coli contains a set of genes homologous to those involved in protein secretion, DNA uptake and the assembly of type-4 fimbriae in other bacteria. Whitchurch CB, et al. Gene, 1994 Dec 2. PMID 7959070
  5. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
T2SSE family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    115714..117099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414649.1 T2SSE family protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414649.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6PMV5
    Conserved Domains (1) summary
    PRK10436
    Location:1 → 459
    PRK10436; hypothetical protein; Provisional
Nucleotide Protein
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