U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ygiF inorganic triphosphatase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947554, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
ygiF
Official Full Name
inorganic triphosphatase
Primary source
ECOCYC:EG11603
Locus tag
b3054
See related
ASAP:ABE-0010020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3044
Summary
ygiF is cotranscribed with glnE . [More information is available at EcoCyc: EG11603].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (3199664..3200965, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase Neighboring gene fused glutamine synthetase deadenylase/glutamine synthetase adenylyltransferase Neighboring gene putative signal transduction protein (SH3 domain) Neighboring gene fused CCA tRNA nucleotidyltransferase/phosphohydrolase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes. Martinez J, et al. J Biol Chem, 2015 Sep 18. PMID 26221030, Free PMC Article
  2. The genes of the glutamine synthetase adenylylation cascade are not regulated by nitrogen in Escherichia coli. van Heeswijk WC, et al. Mol Microbiol, 1993 Aug. PMID 8412694
  3. High inorganic triphosphatase activities in bacteria and mammalian cells: identification of the enzymes involved. Kohn G, et al. PLoS One, 2012. PMID 22984449, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables inorganic triphosphate phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables inorganic triphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables inorganic triphosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inorganic triphosphatase
NP_417526.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3199664..3200965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417526.1 inorganic triphosphatase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417526.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EC17
    Conserved Domains (1) summary
    COG3025
    Location:1 → 432
    PPPi; Inorganic triphosphatase YgiF, contains CYTH and CHAD domains [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.