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ydhI DUF1656 domain-containing protein YdhI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947559, updated on 17-Dec-2024

Summary

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Official Symbol
ydhI
Official Full Name
DUF1656 domain-containing protein YdhI
Primary source
ECOCYC:G6883
Locus tag
b1643
See related
ASAP:ABE-0005499
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1639
Summary
The ydhI gene is paralogous to aaeX. [More information is available at EcoGene: EG13943].
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Genomic context

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Sequence:
NC_000913.3 (1721025..1721261)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene outer membrane lipoprotein SlyB Neighboring gene DNA-binding transcriptional dual regulator SlyA Neighboring gene putative membrane fusion protein YdhJ Neighboring gene putative transporter YdhK

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved and variable functions of the sigmaE stress response in related genomes. Rhodius VA, et al. PLoS Biol, 2006 Jan. PMID 16336047, Free PMC Article
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DUF1656 domain-containing protein YdhI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1721025..1721261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416160.1 DUF1656 domain-containing protein YdhI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416160.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A454A4E2
    Conserved Domains (1) summary
    pfam07869
    Location:16 → 70
    DUF1656; Protein of unknown function (DUF1656)
Nucleotide Protein
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