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alx putative membrane-bound redox modulator Alx [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947607, updated on 17-Dec-2024

Summary

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Official Symbol
alx
Official Full Name
putative membrane-bound redox modulator Alx
Primary source
ECOCYC:G7607
Locus tag
b3088
See related
ASAP:ABE-0010151
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3079; ygjT
Summary
Alx is a predicted to be a membrane-bound redox modulator . [More information is available at EcoCyc: G7607].
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Genomic context

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Sequence:
NC_000913.3 (3238580..3239545)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF218 domain-containing protein YgjQ Neighboring gene putative oxidoreductase YgjR Neighboring gene serine/threonine:Na(+) symporter Neighboring gene inner membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A pH-responsive riboregulator. Nechooshtan G, et al. Genes Dev, 2009 Nov 15. PMID 19933154, Free PMC Article
  2. Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. Pomposiello PJ, et al. J Bacteriol, 2001 Jul. PMID 11395452, Free PMC Article
  3. Alkaline induction of a novel gene locus, alx, in Escherichia coli. Bingham RJ, et al. J Bacteriol, 1990 Apr. PMID 2108134, Free PMC Article
  4. Computational identification of noncoding RNAs in E. coli by comparative genomics. Rivas E, et al. Curr Biol, 2001 Sep 4. PMID 11553332
  5. Oxygen limitation modulates pH regulation of catabolism and hydrogenases, multidrug transporters, and envelope composition in Escherichia coli K-12. Hayes ET, et al. BMC Microbiol, 2006 Oct 6. PMID 17026754, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to pH IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within cellular response to pH IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative membrane-bound redox modulator Alx

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3238580..3239545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_026201.1 putative membrane-bound redox modulator Alx [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_026201.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X3J9V3
    Conserved Domains (1) summary
    TIGR03718
    Location:6 → 312
    R_switched_Alx; integral membrane protein, TerC family
Nucleotide Protein
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