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hyfJ putative hydrogenase 4 assembly protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947713, updated on 17-Dec-2024

Summary

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Official Symbol
hyfJ
Official Full Name
putative hydrogenase 4 assembly protein
Primary source
ECOCYC:G7307
Locus tag
b2490
See related
ASAP:ABE-0008200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2486
Summary
The hyfJ gene is part of the hyf operon, and expression of adjacent genes may be translationally coupled . [More information is available at EcoCyc: G7307].
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Genomic context

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Sequence:
NC_000913.3 (2611457..2611870)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene hydrogenase 4 component F Neighboring gene hydrogenase 4 catalytic subunit HyfG Neighboring gene hydrogenase 4 component H Neighboring gene hydrogenase 4 catalytic subunit HyfI Neighboring gene DNA-binding transcriptional activator HyfR Neighboring gene formate channel FocB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 12-cistron Escherichia coli operon (hyf) encoding a putative proton-translocating formate hydrogenlyase system. Andrews SC, et al. Microbiology (Reading), 1997 Nov. PMID 9387241
  2. Regulation of the hydrogenase-4 operon of Escherichia coli by the sigma(54)-dependent transcriptional activators FhlA and HyfR. Skibinski DA, et al. J Bacteriol, 2002 Dec. PMID 12426353, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative hydrogenase 4 assembly protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2611457..2611870
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416985.4 putative hydrogenase 4 assembly protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416985.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3JF09
    Conserved Domains (1) summary
    PRK15084
    Location:5 → 136
    PRK15084; formate hydrogenlyase maturation protein HycH; Provisional
Nucleotide Protein
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