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rplQ 50S ribosomal subunit protein L17 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947784, updated on 3-Dec-2024

Summary

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Official Symbol
rplQ
Official Full Name
50S ribosomal subunit protein L17
Primary source
ECOCYC:EG10878
Locus tag
b3294
See related
ASAP:ABE-0010799
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3281
Summary
The L17 protein is a component of the 50S subunit of the ribosome. [More information is available at EcoCyc: EG10878].
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Genomic context

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Sequence:
NC_000913.3 (3439616..3439999, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator ZntR Neighboring gene DUF1992 domain-containing protein YhdN Neighboring gene RNA polymerase subunit alpha Neighboring gene 30S ribosomal subunit protein S4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutations to Less-Preferred Synonymous Codons in a Highly Expressed Gene of Escherichia coli: Fitness and Epistatic Interactions. Hauber DJ, et al. PLoS One, 2016. PMID 26727272, Free PMC Article
  2. A quaternary complex consisting of two molecules of tRNA and ribosomal proteins L2 and L17. Metspalu E, et al. FEBS Lett, 1981 Sep 14. PMID 6170527
  3. A peptide deformylase-ribosome complex reveals mechanism of nascent chain processing. Bingel-Erlenmeyer R, et al. Nature, 2008 Mar 6. PMID 18288106
  4. Transcriptional organization of the S10, spc and alpha operons of Escherichia coli. Lindahl L, et al. Biochim Biophys Acta, 1990 Aug 27. PMID 2207163
  5. Identification of a gene for the alpha-subunit of RNA polymerase at the str-spc region of the Escherichia coli chromosome. Jaskunas SR, et al. Proc Natl Acad Sci U S A, 1975 Dec. PMID 1108010, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Several synonymous mutations confer strong selective disadvantage. Negative, synergistic epistasis occurs when all 5 synonymous mutations are introduced together as a single allele.
    Title: Mutations to Less-Preferred Synonymous Codons in a Highly Expressed Gene of Escherichia coli: Fitness and Epistatic Interactions.
  2. N-terminus verified by Edman degradation on complete protein
    Title: A method for the chemical generation of N-terminal peptide sequence tags for rapid protein identification.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in ribosomal large subunit assembly IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic large ribosomal subunit IPI
Inferred from Physical Interaction
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
50S ribosomal subunit protein L17

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3439616..3439999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417753.1 50S ribosomal subunit protein L17 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417753.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S0FJK6, A0A8S7CUB8
    Conserved Domains (1) summary
    PRK05591
    Location:4 → 116
    rplQ; 50S ribosomal protein L17; Validated
Nucleotide Protein
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