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rplP 50S ribosomal subunit protein L16 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947806, updated on 3-Dec-2024

Summary

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Official Symbol
rplP
Official Full Name
50S ribosomal subunit protein L16
Primary source
ECOCYC:EG10877
Locus tag
b3313
See related
ASAP:ABE-0010846
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3300
Summary
The L16 protein is a late assembly component of the 50S subunit of the ribosome; ribosomes lacking L16 are translationally active . [More information is available at EcoCyc: EG10877].
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Genomic context

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Sequence:
NC_000913.3 (3448759..3449169, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L14 Neighboring gene 30S ribosomal subunit protein S17 Neighboring gene 50S ribosomal subunit protein L29 Neighboring gene 30S ribosomal subunit protein S3 Neighboring gene 50S ribosomal subunit protein L22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Occurrence of methylated amino acids as N-termini of proteins from Escherichia coli ribosomes. Chen R, et al. J Mol Biol, 1977 Apr. PMID 323502
  2. Ribosomal proteins. XXVI. The number of specific protein binding sites on 16 s and 23 s RNA of Escherichia coli. Stöffler G, et al. J Mol Biol, 1971 Dec 14. PMID 4944932
  3. The modification of the peptidyltransferase activity of 50-S ribosomal subunits, LiCl-split proteins and L16 ribosomal protein by pyridoxal phosphate. Baxter RM, et al. Eur J Biochem, 1980 Sep. PMID 6254759
  4. The interaction of ribosomal protein L16 and its fragments with tRNA. Remme J, et al. FEBS Lett, 1983 Mar 21. PMID 6352325
  5. The importance of the Escherichia coli ribosomal protein L16 for the reconstitution of the peptidyl-tRNA hydrolysis activity of peptide chain termination. Tate WP, et al. J Biol Chem, 1983 Nov 10. PMID 6355096

See all (34) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: The primary structure of protein L16 located at the peptidyltransferase center of Escherichia coli ribosomes.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables rRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables tRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in ribosomal large subunit assembly IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic large ribosomal subunit IPI
Inferred from Physical Interaction
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
50S ribosomal subunit protein L16

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3448759..3449169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417772.1 50S ribosomal subunit protein L16 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417772.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5C9AP73
    Conserved Domains (1) summary
    PRK09203
    Location:1 → 133
    rplP; 50S ribosomal protein L16; Reviewed
Nucleotide Protein
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