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yhhH PF15631 family protein YhhH [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947993, updated on 3-Dec-2024

Summary

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Official Symbol
yhhH
Official Full Name
PF15631 family protein YhhH
Primary source
ECOCYC:EG11520
Locus tag
b3483
See related
ASAP:ABE-0011373
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3467
Summary
Overexpression causes abnormal biofilm architecture. ybbC and yhhH are paralogs. [More information is available at EcoGene: EG11520].
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Genomic context

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Sequence:
NC_000913.3 (3623399..3623782)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene Ni(2(+)) ABC transporter ATP binding subunit NikD Neighboring gene Ni(2(+)) ABC transporter ATP binding subunit NikE Neighboring gene DNA-binding transcriptional repressor NikR Neighboring gene rhs element protein RhsB Neighboring gene pseudo Neighboring gene putative transposase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement. Jackson AP, et al. BMC Genomics, 2009 Dec 7. PMID 19968874, Free PMC Article
  2. Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories. Zhao S, et al. J Bacteriol, 1993 May. PMID 8387990, Free PMC Article
  3. Systematic characterization of Escherichia coli genes/ORFs affecting biofilm formation. Tenorio E, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900028
  4. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  5. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
PF15631 family protein YhhH

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3623399..3623782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417940.2 PF15631 family protein YhhH [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417940.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2G4ACG3
    Conserved Domains (1) summary
    pfam15631
    Location:60 → 127
    Imm-NTF2-2; NTF2 fold immunity protein
Nucleotide Protein
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