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glaR DNA-binding transcriptional repressor GlaR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948055, updated on 3-Dec-2024

Summary

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Official Symbol
glaR
Official Full Name
DNA-binding transcriptional repressor GlaR
Primary source
ECOCYC:EG12386
Locus tag
b2664
See related
ASAP:ABE-0008765
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
csiR; ECK2658; gabC; ygaE
Summary
[More information is available at EcoGene: EG12386]. GabC is a regulator of gab gene expression . [More information is available at EcoCyc: EG12386].
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Genomic context

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Sequence:
NC_000913.3 (2795674..2796336)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 4-aminobutyrate aminotransferase GabT Neighboring gene 4-aminobutanoate:H(+) symporter Neighboring gene K(+) binding protein Neighboring gene Pmp3 family protein YqaE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic analysis of the gamma-aminobutyrate utilization pathway in Escherichia coli K-12. Dover S, et al. J Bacteriol, 1974 Feb. PMID 4590473, Free PMC Article
  2. Control of the pathway of -aminobutyrate breakdown in Escherichia coli K-12. Dover S, et al. J Bacteriol, 1972 Apr. PMID 4552985, Free PMC Article
  3. Utilization of -aminobutyric acid as the sole carbon and nitrogen source by Escherichia coli K-12 mutants. Dover S, et al. J Bacteriol, 1972 Feb. PMID 4550821, Free PMC Article
  4. Novel type of catabolite repression in the pathway of gamma-aminobutyrate breakdown in Escherichia coli K-12. Dover S, et al. FEBS Lett, 1973 Dec 1. PMID 4357819
  5. In vivo cloning and characterization of the gabCTDP gene cluster of Escherichia coli K-12. Metzer E, et al. J Bacteriol, 1990 Jun. PMID 2188954, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of DNA-templated transcription initiation IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within negative regulation of DNA-templated transcription initiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DNA-binding transcriptional repressor GlaR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2795674..2796336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417150.4 DNA-binding transcriptional repressor GlaR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417150.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A828NHB7
    Conserved Domains (1) summary
    PRK11534
    Location:1 → 220
    PRK11534; DNA-binding transcriptional regulator CsiR; Provisional
Nucleotide Protein
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