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yhjX putative transporter YhjX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948066, updated on 3-Dec-2024

Summary

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Official Symbol
yhjX
Official Full Name
putative transporter YhjX
Primary source
ECOCYC:EG12268
Locus tag
b3547
See related
ASAP:ABE-0011586
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3534
Summary
YhjX is predicted to be a oxalate-formate antiporter; may function with frc and oxc to catabolize oxalate. [More information is available at EcoGene: EG12268]. YhjX is an uncharacterised member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG12268].
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Genomic context

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Sequence:
NC_000913.3 (3710799..3712007, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene phosphoethanolamine transferase EptB Neighboring gene putative outer membrane protein YhjY Neighboring gene 3-methyl-adenine DNA glycosylase I, constitutive Neighboring gene peptidyl-lysine N-acetyltransferase YiaC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rapid acid treatment of Escherichia coli: transcriptomic response and recovery. Kannan G, et al. BMC Microbiol, 2008 Feb 26. PMID 18302792, Free PMC Article
  2. Identification of a target gene and activating stimulus for the YpdA/YpdB histidine kinase/response regulator system in Escherichia coli. Fried L, et al. J Bacteriol, 2013 Feb. PMID 23222720, Free PMC Article
  3. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
  4. Repression of small toxic protein synthesis by the Sib and OhsC small RNAs. Fozo EM, et al. Mol Microbiol, 2008 Dec. PMID 18710431, Free PMC Article
  5. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to nutrient levels IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane transport RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
putative transporter YhjX

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3710799..3712007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418003.1 putative transporter YhjX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418003.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376M0S8
    Conserved Domains (1) summary
    TIGR00890
    Location:9 → 374
    2A0111; oxalate/formate antiporter family transporter
Nucleotide Protein
Heading Accession and Version

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